To appear
- Reid, Stephen and Taylor, Jonathan and Tibshirani, Robert A general framework for estimation and inference from clusters of features
- Taylor, Jonathan and Tibshirani, Robert Post-selection inference for L1-penalized likelihood models
- Tian, Xiaoying and Taylor, Jonathan Asymptotics of selective inference
- Choi, Yunjin and Taylor, Jonathan and Tibshirani, Robert Selecting the number of principal components
- Reid, Stephen and Taylor, Jonathan and Tibshirani, Robert Post-selection point and interval estimation of signal sizes in Gaussian samples
Preprints
- Harris, Xiaoying Tian and Panigrahi, Snigdha and Markovic, Jelena and Bi, Nan and Taylor, Jonathan Selective sampling after solving a convex problem
- Panigrahi, Snigdha and Taylor, Jonathan and Weinstein, Asaf Bayesian Post-Selection Inference in the Linear Model
- Tian, Xiaoying and Bi, Nan and Taylor, Jonathan MAGIC
- Adler, Robert J. and Krishnan, Sunder Ram and Taylor, Jonathan E. and Weinberger, Shmuel The Reach of Randomly Embedded Manifolds
- Fithian, William and Taylor, Jonathan and Tibshirani, Robert and Tibshirani, Ryan Selective Sequential Model Selection
- Gross, Samuel M. and Taylor, Jonathan and Tibshirani, Robert A Selective Approach to Internal Inference
- Tian, Xiaoying and Loftus, Joshua R. and Taylor, Jonathan E. Selective inference with unknown variance via the square-root LASSO
- Tian, Xiaoying and Taylor, Jonathan E. Selective inference with a randomized response
- Fithian, William and Sun, Dennis and Taylor, Jonathan Optimal Inference After Model Selection
- Loftus, Joshua R. and Taylor, Jonathan E. A significance test for forward stepwise model selection
- Sun, Yuekai and Taylor, Jonathan E. Valid post-correction inference for censored regression problems
- G’Sell, Max Grazier and Taylor, Jonathan and Tibshirani, Robert Adaptive testing for the graphical lasso
2017
- Bobrowski, Omer and Mukherjee, Sayan and Taylor, Jonathan E. Topological consistency via kernel estimation
- Krishnan, Sunder Ram and Taylor, Jonathan E. and Adler, Robert J. The Intrinsic geometry of some random manifolds
- Lee, Jason D. and Liu, Qiang and Sun, Yuekai and Taylor, Jonathan E. Communication-efficient Sparse Regression
2016
- Lee, Jason D. and Sun, Dennis L. and Sun, Yuekai and Taylor, Jonathan E. Exact post-selection inference, with application to the lasso
- Naul, Brett and Taylor, Jonathan Sparse Steinian Covariance Estimation
- Taylor, Jonathan E. and Loftus, Joshua R. and Tibshirani, Ryan J. Inference in adaptive regression via the Kac–Rice formula
- Tibshirani, Ryan J. and Taylor, Jonathan and Lockhart, Richard and Tibshirani, Robert Exact Post-Selection Inference for Sequential Regression Procedures
- Wager, Stefan and Du, Wenfei and Taylor, Jonathan and Tibshirani, Robert J. High-dimensional regression adjustments in randomized experiments
2015
- Clarke, Brian and Jakobson, Dmitry and Kamran, Niky and Silberman, Lior and Taylor, Jonathan Gaussian measures on the of space of Riemannian metrics
- Lee, Jason D. and Sun, Yuekai and Taylor, Jonathan E. On model selection consistency of regularized M-estimators
- Taylor, Jonathan and Tibshirani, Robert J. Statistical learning and selective inference
2014
2013
- Adler, Robert J. and Samorodnitsky, Gennady and Taylor, Jonathan E. High level excursion set geometry for non-Gaussian infinitely divisible random fields
- Bien, Jacob and Taylor, Jonathan and Tibshirani, Robert A lasso for hierarchical interactions
- Grosenick, Logan and Klingenberg, Brad and Katovich, Kiefer and Knutson, Brian and Taylor, Jonathan E. Interpretable whole-brain prediction analysis with GraphNet
- Melikian, George L. and Rhee, Soo-Yon and Varghese, Vici and Porter, Danielle and White, Kirsten and Taylor, Jonathan and Towner, William and Troia, Paolo and Burack, Jeffrey and Dejesus, Edwin and Robbins, Gregory K. and Razzeca, Kristin and Kagan, Ron and Liu, Tommy F. and Fessel, W. Jeffrey and Israelski, Dennis and Shafer, Robert W. Non-nucleoside reverse transcriptase inhibitor (NNRTI) cross-resistance
- Taylor, Jonathan The geometry of least squares in the 21st century
- Taylor, Jonathan E. and Vadlamani, Sreekar Random fields and the geometry of Wiener space
- Taylor, Jonathan and Worsley, Keith Detecting sparse cone alternatives for Gaussian random fields, with an application to fMRI
2012
- Melikian, George L. and Rhee, Soo-Yon and Taylor, Jonathan and Fessel, W. Jeffrey and Kaufman, David and Towner, William and Troia-Cancio, Paolo V. and Zolopa, Andrew and Robbins, Gregory K. and Kagan, Ron and Israelski, Dennis and Shafer, Robert W. Standardized comparison of the relative impacts of HIV-1 reverse transcriptase (RT) mutations on nucleoside RT inhibitor susceptibility
- Tibshirani, Robert and Bien, Jacob and Friedman, Jerome and Hastie, Trevor and Simon, Noah and Taylor, Jonathan and Tibshirani, Ryan J. Strong rules for discarding predictors in lasso-type problems
- Tibshirani, Ryan J. and Taylor, Jonathan E. Degrees of freedom in lasso problems
2011
2010
- Grant, Philip M. and Taylor, Jonathan and Nevins, Andrew B. and Calvez, Vincent and Marcelin, Anne-Geneviève and Wirden, Marc and Zolopa, Andrew R. International cohort analysis of the antiviral activities of zidovudine and tenofovir in the presence of the K65R mutation in reverse transcriptase
- Rhee, Soo-Yon and Taylor, Jonathan and Fessel, W. Jeffrey and Kaufman, David and Towner, William and Troia, Paolo and Ruane, Peter and Hellinger, James and Shirvani, Vivian and Zolopa, Andrew and Shafer, Robert W. HIV1 Protease Mutations and Protease Inhibitor Cross Resistance
- Samorodnitsky, Gennady, Robert J. Adler and Taylor, Jonathan E. Excursion sets of three classes of stable random fields
- Schwartzman, Armin and Dougherty, Robert F. and Taylor, Jonathan Group Comparison of Eigenvalues and Eigenvectors of Diffusion Tensors
- Talbot, Annie and Grant, Philip and Taylor, Jonathan and Baril, Jean-Guy and Liu, Tommy Fulisma and Charest, Hugues and Brenner, Bluma and Roger, Michel and Shafer, Robert and Cantin, Régis and Zolopa, Andrew Predicting tipranavir and darunavir resistance using genotypic, phenotypic, and virtual phenotypic resistance patterns
2009
- Grant, Philip and Taylor, Jonathan and Cain, Pat and Short, William and Gallant, Joel and Farthing, Charles and Thal, Gary and Coakley, Eoin and Zolopa, Andrew Maintaining reduced viral fitness and CD4 response in HIV-infected patients with viremia receiving a boosted protease inhibitor
- Rhee, Soo-Yon and Fessel, W. Jeffrey and Liu, Tommy F. and Marlowe, Natalia M. and Rowland, Charles M. and Rode, Richard A. and Vandamme, Anne-Mieke and Van Laethem, Kristel and Brun-Vezinet, Francoise and Calvez, Vincent and Taylor, Jonathan and Hurley, Leo and Horberg, Michael and Shafer, Robert W. Predictive value of HIV-1 genotypic resistance test interpretation algorithms
- Schwartzman, Armin and Dougherty, Robert F. and Lee, Jongho and Ghahremani, Dara and Taylor, Jonathan E. Empirical null and false discovery rate analysis in neuroimaging
- Taylor, Jonathan E. and Adler, Robert J. Gaussian processes, kinematic formulae and Poincare’s limit
2008
- Chamandy, N. and Worsley, K. J. and Taylor, J. and Gosselin, F. Tilted Euler characteristic densities for Central Limit random fields, with application to “bubbles”
- Schwartzman, Armin Schwartzman and Mascarenhas, W. and Taylor, Jonathan E. Inference for eigenvalues and eigenvectors of Gaussian symmetric matrices
- Schwartzman, Armin and Dougherty, Robert and Taylor, Jonathan E. False discovery rate analysis of brain diffusion direction maps
- Taylor, J. E. and Worsley, K. J. Random fields of multivariate test statistics, with applications to shape analysis
2007
- Hastie, Trevor and Taylor, Jonathan and Tibshirani, Robert and Walther, Guenther Forward stagewise regression and the monotone lasso
- Taylor, J. E. and Worsley, K. J. and Gosselin, F. Maxima of discretely sampled random fields, with an application to ’bubbles’
- Taylor, Jonathan E. and Worsley, Keith J. Detecting Sparse Signals in Random Fields, With an Application to Brain Mapping
2006
- Rhee, Soo-Yon and Taylor, Jonathan and Wadhera, Gauhar and Ben-Hur, Asa and Brutlag, Douglas L. and Shafer, Robert W. Genotypic predictors of human immunodeficiency virus type 1 drug resistance
- Taylor, J. E. and Worsley, K. J. Inference for magnitudes and delays of responses in the FIAC data using BRAINSTAT/FMRISTAT
- Taylor, Jonathan E. A Gaussian kinematic formula
- Taylor, Jonathan and Tibshirani, Robert A tail strength measure for assessing the overall univariate significance in a dataset
- Worsley, K. J. and Taylor, J. E. Detecting fMRI activation allowing for unknown latency of the hemodynamic response
2005
- Knutson, Brian and Taylor, Jonathan and Kaufman, Matthew and Peterson, Richard and Glover, Gary Distributed Neural Representation of Expected Value
- Rhee, Soo‐Yon and Fessel, W. Jeffrey and Zolopa, Andrew R. and Hurley, Leo and Liu, Tommy and Taylor, Jonathan and Nguyen, Dong Phuong and Slome, Sally and Klein, Daniel and Horberg, Michael and Flamm, Jason and Follansbee, Stephen and Schapiro, Jonathan M. and Shafer, Robert W. HIV1 Protease and Reverse Transcriptase Mutations
- Schwartzman, Armin and Dougherty, Robert F. and Taylor, Jonathan E. Cross-subject comparison of principal diffusion direction maps
- Taylor, Jonathan and Takemura, Akimichi and Adler, Robert Validity of the expected Euler characteristic heuristic
- Taylor, Jonathan and Tibshirani, Robert and Efron, Bradley The ’miss rate’ for the analysis of gene expression data
- Zhang, Jie and Rhee, Soo-Yon and Taylor, Jonathan and Shafer, Robert W. Comparison of the precision and sensitivity of the Antivirogram and PhenoSense HIV drug susceptibility assays
2004
- Kantor, Rami and Shafer, Robert W. and Follansbee, Stephen and Taylor, Jonathan and Shilane, David and Hurley, Leo and Nguyen, Dong-Phuong and Katzenstein, David and Fessel, W. Jeffrey Evolution of resistance to drugs in HIV-1-infected patients failing antiretroviral therapy
- Storey, John D. and Taylor, Jonathan E. and Siegmund, David Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates
- Worsley, Keith J. and Taylor, Jonathan E. and Tomaiuolo, Francesco and Lerch, Jason Unified univariate and multivariate random field theory
2003
- Charil, Arnaud and Zijdenbos, Alex P. and Taylor, Jonathan and Boelman, Cyrus and Worsley, Keith J. and Evans, Alan C. and Dagher, Alain Statistical mapping analysis of lesion location and neurological disability in multiple sclerosis
- Chung, Moo K. and Worsley, Keith J. and Robbins, Steve and Paus, Tomás and Taylor, Jonathan and Giedd, Jay N. and Rapoport, Judith L. and Evans, Alan C. Deformation-based surface morphometry applied to gray matter deformation
- Taylor, Jonathan E. and Adler, Robert J. Euler characteristics for Gaussian fields on manifolds
- Wu, Thomas D. and Schiffer, Celia A. and Gonzales, Matthew J. and Taylor, Jonathan and Kantor, Rami and Chou, Sunwen and Israelski, Dennis and Zolopa, Andrew R. and Fessel, W. Jeffrey and Shafer, Robert W. Mutation patterns and structural correlates in human immunodeficiency virus type 1 protease following different protease inhibitor treatments